mmcci.io.read_CellPhoneDB

mmcci.io.read_CellPhoneDB(means_path, pvals_path, n_spots=None) CCIData[source]

Reads a CellPhoneDB interaction scores txt file and converts it to a CCIDataobject.

Parameters:
  • means_path (str) – Path to the means txt file.

  • pvals_path (str) – Path to the pvals txt file.

  • n_spots (int) (optional) – The number of spots. Defaults to None.

Returns:

The CCIData object.

Return type:

CCIData